Python package treex

treex is a Python package dedicated to tree data analysis. Trees can be ordered or not, with or without labels on their vertices. The package provides a data structure for rooted trees as well as algorithms and methods for, e.g., random generation, lossless and lossy compression, pattern recognition, convolution kernel computation, and visualization.
[gitlab] [anaconda] [joss]

Lattice models: WebGL applications built with Unity / C#

  • 2d Ising model: Glauber dynamics
  • 2d cellular Potts model: modified Metropolis algorithm

R packages