Below are listed all the articles I participated in that have been accepted for publication in international scientific journals (with reviewing committee).

Mosaic

• Spatiotemporally distinct responses to mechanical forces shape the developing seed of Arabidopsis

  Bauer, A. et al | EMBO journal (2024).

• Revisiting the relationship between turgor pressure and plant cell growth¹

  Ali, O. et al | New Phytologist (2023).

• Evidence that endosperm turgor pressure both promotes and restricts seed growth and size¹²

  Creff, A. et al | Nature Communication (2022).

• BVPy: A FEniCS-based Python package to ease the expression and study of boundary value problems in Biology.²

  Gacon, F. et al. | Jour. of Open Source Software (2021).

• Microtubule-Mediated Wall Anisotropy Contributes to Leaf Blade Flattening.¹

  Zhao, F. et al. | Current Biology (2020).

• Simulating Turgor-Induced Stress Patterns in Multilayered Plant Tissues.¹

  Ali, O. et al. | Bulletin of Mathematical Biology (2019).

• Regulation of plant cell wall stiffness by mechanical stress: a mesoscale physical model.²

  Oliveri, H. et al. | Journal of Mathematical Biology (2018).

• Transcriptional induction of cell wall remodelling genes is coupled to microtubule-driven growth isotropy at the shoot apex in Arabidopsis.

  Armezzani, A. et al. | Development (2018).

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Virtual Plants

• DRACO-STEM: An Automatic Tool to Generate High-Quality 3D Meshes of Shoot Apical Meristem Tissue at Cell Resolution.

  Cerutti, G. et al. | Frontiers in Plant Science (2017).

• Force-Driven Polymerization and Turgor-Induced Wall Expansion.¹

  Ali, O. & Traas, J. | Trends in Plant Science (2016).

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Post-Doc

• A computational framework for 3D mechanical modeling of plant morphogenesis with cellular resolution.¹

  Boudon, F. et al. | PLoS Computational Biology (2015).

• An auxin-mediated shift toward growth isotropy promotes organ formation at the shoot meristem in Arabidopsis.

  Sassi, M. et al. | Current biology (2014).

• Physical models of plant development.¹

  Ali, O. et al. | Annual review of cell & dev. biol. (2014).

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PhD

• Cooperativity between integrin activation and mechanical stress leads to integrin clustering.¹

  Ali, O. et al. | Biophysical Journal (2011).

• Excitable waves at the margin of the contact area between a cell and a substrate.¹

  Ali, O. et al. | Physical Biology (2009).

• Physical model for membrane protrusions during spreading.

  Chamaraux, F. et al. | Physiscal Biology (2008).

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1. First or co-first author. ↩↩↩↩↩↩↩↩↩

2. Corresponding or co-corrresponding author. ↩↩↩