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start [2021/05/14 18:55]
Nicolas Schabanel [Students]
start [2021/11/17 14:19]
Nicolas Schabanel [Publications]
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 ==== Softwares ==== ==== Softwares ====
-  * :!: **[[http://​www.ens-lyon.fr/​ensnano|ENSnano]]**:​ a 3D DNA nanostructure design software for Windows, Mac OS and linux\\ codeveloped with [[http://​perso.ens-lyon.fr/​nicolas.levy|Nicolas Levy]], 2021 [ [[http://​www.ens-lyon.fr/​ensnano|website]] ]+  * :!: **[[http://​www.ens-lyon.fr/​ensnano|ENSnano]]**:​ a 3D DNA nanostructure design software for Windows, Mac OS and linux\\ codeveloped with [[http://​perso.ens-lyon.fr/​nicolas.levy|Nicolas Levy]], 2021 [ [[http://​www.ens-lyon.fr/​ensnano|website]] |  [[https://​www.youtube.com/​channel/​UC-5XMNJouMPsB9pW5Q9UVcA|youtube channel]] ] 
 +  * :!: **[[http://​perso.ens-lyon.fr/​nicolas.schabanel/​OSsimulator|OS simulator]]**:​ a fast and memory-efficient iPad app that simulates arbitrary Oritatami Systems //(works with limitations on Apple silicon M1 too)//, 2021 [ [[http://​perso.ens-lyon.fr/​nicolas.schabanel/​OSsimulator|website]] | [[https://​apps.apple.com/​us/​app/​simple-os-simulator/​id1530162352|download]] ]
   * **[[https://​apps.apple.com/​us/​app/​caos-simulator/​id1488203962|CAOS simulator]]**:​ an iOS app implementing our Oritatami cellular automata simulation, 2020 \\ [ [[https://​hub.darcs.net/​nikaoOoOoO/​CAOSSimulator|source code]] ]   * **[[https://​apps.apple.com/​us/​app/​caos-simulator/​id1488203962|CAOS simulator]]**:​ an iOS app implementing our Oritatami cellular automata simulation, 2020 \\ [ [[https://​hub.darcs.net/​nikaoOoOoO/​CAOSSimulator|source code]] ]
   * **[[https://​itunes.apple.com/​us/​app/​id1335581323|Scary Pacman]]**: an iOS app implementing our Oritatami scaling algorihms, 2018\\ [ [[https://​hub.darcs.net/​nikaoOoOoO/​OritatamiScaling|source code]] ]   * **[[https://​itunes.apple.com/​us/​app/​id1335581323|Scary Pacman]]**: an iOS app implementing our Oritatami scaling algorihms, 2018\\ [ [[https://​hub.darcs.net/​nikaoOoOoO/​OritatamiScaling|source code]] ]
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 ==== Publications ==== ==== Publications ====
   *  **2021**   *  **2021**
-     * **[[%%publiRoot%%/​2021/​2021-LevySchabanel.pdf|ENSnano: a 3D modeling software for DNA nanostructures]]** \\  ​Nicolas Levy, Nicolas Schabanel. Submitted, 2021. :!: Download ENSnano at[[https://www.ens-lyon.fr/ensnano|ENSnano website]] ] +     * **[[%%publiRoot%%/​2021/​2021-PchelinaSchabanelSekiTheyssier.pdf|Oritatami systems assemble shapes no less 
-     * **[[%%publiRoot%%/​2021/​2021-PchelinaSchabanelSekiTheyssier.pdf|Oritatami simulates self-avoiding 2D Turing machines]]** \\  ​Daria Pchelina, Nicolas Schabanel, ​Shinnosuke SekiGuillaume TheyssierSubmitted, 2021. [[%%publiRoot%%/2021/oritatami-turedo-rule.pdf|Supplementary material]]+complex than tile assembly model (aTAM)]]** \\  ​Daria Pchelina, Nicolas Schabanel, Shinnosuke Seki, Guillaume Theyssier. Submitted, 2021. \\ Supplementary material: [[https://hub.darcs.net/turedo2oritatami/​turedo2oritatami|Turedo2oritatami compiler]] 
 +     * **[[%%publiRoot%%/​2021/​2021-LevySchabanel.pdf|ENSnano: a 3D modeling software for DNA nanostructures]]** \\  ​Nicolas Levy, Nicolas Schabanel. //In Proc. of [[http://​dna27.iopconfs.org/​home|DNA27]]//​LIPIcsvol205, pp.5:1-23, doi:​10.4230/​LIPIcs.DNA.27.5, 2021. **:!: best student paper & best presentation award.** ​ \\ :!: Download ENSnano at: [ [[https://www.ens-lyon.fr/ensnano|ENSnano website]] ] [ [[https://​www.youtube.com/​channel/​UC-5XMNJouMPsB9pW5Q9UVcA|Youtube channel]] ]
   *  **2020**    *  **2020**
      * **[[%%publiRoot%%/​2020/​2020-LATIN-PchelinaSchabanelSekiUbukata.pdf|Simple Intrinsic Simulation of Cellular Automata in Oritatami Molecular Folding Model]]** [ [[https://​hal.archives-ouvertes.fr/​hal-02410874/​document|Full version]] ] \\  Daria Pchelina, Nicolas Schabanel, Shinnosuke Seki, Yuki Ubukata. In //​[[http://​latin2020.ime.usp.br/​|LATIN]]//,​ Sao Paulo, 2020. [[https://​hal.archives-ouvertes.fr/​hal-02410874v1|hal-02410874]]\\ //:!: Download the iOS app [[https://​apps.apple.com/​us/​app/​caos-simulator/​id1488203962|CAOS simulator]] implementing our simulation [ [[https://​hub.darcs.net/​nikaoOoOoO/​CAOSSimulator|source code]] ]//      * **[[%%publiRoot%%/​2020/​2020-LATIN-PchelinaSchabanelSekiUbukata.pdf|Simple Intrinsic Simulation of Cellular Automata in Oritatami Molecular Folding Model]]** [ [[https://​hal.archives-ouvertes.fr/​hal-02410874/​document|Full version]] ] \\  Daria Pchelina, Nicolas Schabanel, Shinnosuke Seki, Yuki Ubukata. In //​[[http://​latin2020.ime.usp.br/​|LATIN]]//,​ Sao Paulo, 2020. [[https://​hal.archives-ouvertes.fr/​hal-02410874v1|hal-02410874]]\\ //:!: Download the iOS app [[https://​apps.apple.com/​us/​app/​caos-simulator/​id1488203962|CAOS simulator]] implementing our simulation [ [[https://​hub.darcs.net/​nikaoOoOoO/​CAOSSimulator|source code]] ]//