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- | Nicolas <color red>Schabane</color> | + | <const> |
+ | siteRoot=http://perso.ens-lyon.fr/nicolas.schabanel | ||
+ | publiRoot=http://perso.ens-lyon.fr/nicolas.schabanel/publications | ||
+ | </const> | ||
+ | |||
+ | <columns 100% center 440 left - > | ||
+ | {{ :ma_pomme.png?440x348 |Ma pomme}}\\ | ||
+ | {{ :email-cnrs.png?250x70 |Courriel}} | ||
+ | |||
+ | <newcolumn> | ||
+ | |||
+ | ==== Nicolas Schabanel === | ||
+ | === Directeur de recherches CNRS === | ||
+ | **[[http://www.cnrs.fr/|CNRS]] - [[http://www.ens-lyon.fr/LIP|LIP]]**\\ | ||
+ | **[[http://www.ens-lyon.fr/|École Normale Supérieure de Lyon]]**\\ | ||
+ | **Site Monnod - Main Building - 3rd floor South**\\ | ||
+ | 46 allée d'Italie\\ | ||
+ | 69364 Lyon Cedex 07\\ | ||
+ | France\\ | ||
+ | Office: **332 (Site Monnod - Main building - 3rd floor - South)**\\ | ||
+ | Phone: +33 4 72 72 80 00 | ||
+ | |||
+ | Resident member of the\\ | ||
+ | **[[http://www.ixxi.fr/|Rhône-Alpes Complex Systems Institute (IXXI)]]**\\ | ||
+ | </columns> | ||
+ | |||
+ | |||
+ | [ [[#My current researches include|Research]] | [[http://www.irif.univ-paris-diderot.fr/~nschaban/GT-COA/|GT CoA]] | [[#Students|Students]] | [[#Publications|Publications]] | [[#Popularization|Popularization]] | [[#Teaching|Teaching]] | [[#Other|Other]] ] | ||
+ | |||
+ | |||
+ | === Upcoming Event === | ||
+ | |||
+ | === Past Event === | ||
+ | * **[[%%siteRoot%%/workshop/ComputingWithMolecularGeometry/|Workshop: Computing with molecular geometry]]**, Villa Finaly, Florence, Italie, Nov. 20-23, 2017\\ //(Co-organizer with Claire Lesieur and Damien Woods) Founded by [[http://www.ixxi.fr|IXXI]], [[https://tapdance.inria.fr/|Tapdance]] and la [[http://www.cnrs.fr/mi/|mission pour l'interdisciplinarité du CNRS]]// | ||
+ | * **[[http://www.irif.univ-paris-diderot.fr/~nschaban/GT-COA/Journees_2017|6èmes journées]] du [[http://www.irif.univ-paris-diderot.fr/~nschaban/GT-COA/|GT CoA]]** (Complexités et Algorithmes), LIP, Lyon, Nov. 27-28, 2017 | ||
+ | * **Research school on [[%%siteRoot%%/enseignement/2017-ER02/|Molecular Programming: Theory & Wet Lab Nano-Scale Computation]]** at **[[http://www.ens-lyon.fr/DI/?cat=77|ENS Lyon]]**, Jan 16-20, 2017. :!: Free to register and open to everyone :!: | ||
+ | |||
+ | === My current researches include === | ||
+ | |||
+ | * **Algorithms:** approximation, randomized, online, distributed,... | ||
+ | * **Complex systems:** such as | ||
+ | * **Algorithmic self-assembly, Molecular folding** | ||
+ | * **Complex networks:** clustering and drawing of dynamical networks | ||
+ | * **Stochastic cellular automata:** definition, analysis, intrinsic simulations, local probabilistic correlations,... | ||
+ | * **Small world phenomenon:** analysis, algorithms design, modelization,... | ||
+ | * **Random systems** | ||
+ | |||
+ | My work is currently supported by the **ANR-2010-BLAN-0204 MAGNUM**, **ANR-12-BS02-005 RDAM** and **IXXI-MOLECAL** grants. | ||
+ | |||
+ | === Students === | ||
+ | * Nicolas **Blanchard** (M2, 2015; PhD advisor 2016-) | ||
+ | * Alberto **Vera Azócar** (U. Chile, several research internships 2013, 2015) | ||
+ | * Damien **Regnault** (PhD co-advisor with Éric Thierry, 2005-2008) | ||
+ | * Julien **Robert** (PhD advisor, 2006-2009) | ||
+ | * Emmanuelle **Lebhar** (PhD co-advisor with Michel Morvan, 2003-2005) | ||
+ | * Sandeep **Dey** (Master thesis advisor, 2005) | ||
+ | |||
+ | === Publications === | ||
+ | * **2017** | ||
+ | * **[[%%publiRoot%%/2017/2017-Oritatami-GearyMeunierSchabanelSeki|Proving the Turing Universality of Oritatami Co-Transcriptional Folding]]**\\ Cody Geary, Pierre-Étienne Meunier, Nicolas Schabanel, Shinnosuke Seki. //Submitted//, 65 pages, july 2017. [ [[http://perso.ens-lyon.fr/nicolas.schabanel/oritatami/|Supplementary materials]] ] | ||
+ | * **[[%%publiRoot%%/2017/2017-Walcom-BlanchardSchabanel.pdf|Dynamic Facility Location: Minimizing the Sum of Radii]]**\\ Nicolas K. Blanchard, Nicolas Schabanel. //[[http://walcom2017.nctu.edu.tw/index.html|WALCOM]]//, LNCS 10167:30-41, march 2017. | ||
+ | * **2016** | ||
+ | * **[[%%publiRoot%%/2016/2016-Automata-Schabanel.pdf|Oritatami systems: a computational model for co-transcriptional folding]]**\\ Nicolas Schabanel. **Invited plenary talk** at //[[http://automata2016.ini.uzh.ch/|Automata]]//, Jun. 2016. | ||
+ | * **[[%%publiRoot%%/2016/2016-MFCS-GearyMeunierSchabanelSeki.pdf|Programming biomolecules that fold greedily during transcription]]**\\ Cody Geary, Pierre-Étienne Meunier, Nicolas Schabanel, Shinnosuke Seki. //[[http://mfcs.ki.agh.edu.pl|MFCS]]//, LIPIcs 58, 43:1-43:14, Aug. 2016. | ||
+ | * **[[%%publiRoot%%/2016/2016-HALG-GearyMeunierSchabanelSeki.pdf|Folding Turing is hard but feasible]]**\\ Cody Geary, Pierre-Étienne Meunier, Nicolas Schabanel, Shinnosuke Seki.//[[http://highlightsofalgorithms.org/program/|HALG]]//, Jun. 2016. | ||
+ | |||
+ | * **2015** | ||
+ | * **[[%%publiRoot%%/2015/2015-DNA21-GearyMeunierSchabanelSeki.pdf|Efficient universal computation by molecular co-transcriptional folding (Short announcement)]]**\\ Cody Geary, Pierre-Étienne Meunier, Nicolas Schabanel, Shinnosuke Seki. //[[http://dna21.wyss.harvard.edu/|DNA21]]//, 1 page, 2015. (Full version in submission, see above) | ||
+ | |||
+ | * **2014** | ||
+ | * **[[%%publiRoot%%/2014/2014-ICALP-EisenstatMathieuSchabanel.pdf|Facility Location in Evolving Metrics]]**\\ with David Eisenstat and Claire Mathieu. //ICALP,// pages 459-470, 2014. | ||
+ | |||
+ | * **2013** | ||
+ | * **[[%%publiRoot%%/2013/2013-FM-ArrighiSchabanelTheyssier.pdf|Stochastic Cellular Automata: Correlations, Decidability and Simulations]]**\\ with Pablo Arrighi and Guillaume Theyssier. //Fundamenta Informaticæ,// 126:121-156, 2013. | ||
+ | |||
+ | * **2012** | ||
+ | * **[[%%publiRoot%%/2012/2012-JAC-ArrighiSchabanelTheyssier.pdf|Intrinsic simulations between stochastic cellular automata]]**\\ with Pablo Arrighi and Guillaume Theyssier. //AUTOMATA & JAC, EPTCS,// 90:208–224, 2012. | ||
+ | * **[[%%publiRoot%%/2012/2012-PBMB-Schabanel.pdf|Randomness + Determinism = Progresses: Why random processes could be favored by evolution]]**\\ //Progress in Biophysics and Moleculer Biology// (Special edition on the conference ”Chance at the heart of the cell”), 110(1):129–136, 2012. | ||
+ | |||
+ | * **2011** | ||
+ | * **[[%%publiRoot%%/2011/2011-Hermes-BertinBeslonGandrillonGrauwinJensenSchabanel.pdf|Les complexités : point de vue d’un institut des systèmes complexes]]** (in French)\\ with Éric Bertin, Guillaume Beslon, Olivier Gandrillon, Sébastian Grauwin, and Pablo Jensen. //Hermès,// 60:145–150, 2011. | ||
+ | * **[[%%publiRoot%%/2011/2011-STOC-GiakkoupisSchabanel.pdf|Optimal path search in small worlds: Dimension matters]]**\\ with George Giakkoupis. //STOC,// 43:393–402, 2011. | ||
+ | * **[[%%publiRoot%%/2011/2011-TERANET-Schabanel.pdf|Analyzing search algorithms in smallworlds]]**\\ //TERANET// (colocated with DISC), 4 pages, Roma, Italy, Sep. 2011. | ||
+ | |||
+ | * **2010** | ||
+ | * **[[%%publiRoot%%/2010/2010-WAOA-PruhsRobertSchabanel.pdf|Minimizing Maximum Flowtime of Jobs with Arbitrary Parallelizability]]**\\ with Kirk Pruhs and Julien Robert. //WAOA,// LNCS 6534:237–248, 2010. | ||
+ | * **[[%%publiRoot%%/2010/HdR-Schabanel.pdf|Systèmes complexes & algorithmes]]** (in French)\\ //Habilitation à diriger des recherches,// Université Paris Diderot, 2010. %%publiRoot%%/2010/HDR-Defense-Schabanel.pdf|Slides}} | ||
+ | * **[[%%publiRoot%%/2010/2010-DMTCS-RegnaultSchabanelThierry.pdf|On the analysis of “simple” 2D stochastic cellular automata]]**\\ with Damien Regnault and Éric Thierry. //Invited publication to the special issue of DMTCS in honor of Philippe Flajolet,// 12(2):263–294, 2009. | ||
+ | |||
+ | * **2009** | ||
+ | * **[[%%publiRoot%%/2009/2009-TCS-Regnault-Schabanel-Thierry.pdf|Progresses in the analysis of stochastic 2D cellular automata: a study of asynchronous 2D Minority]]**\\ with Damien Regnault and Éric Thierry. //TCS,// 410(47-49):4844-4855S, 2009. [[http://dx.doi.org/10.1016/j.tcs.2009.06.024|doi:10.1016/j.tcs.2009.06.024]] | ||
+ | |||
+ | * **2008** | ||
+ | * **[[%%publiRoot%%/2008/2008-SODA-RS.pdf|Non-Clairvoyant Scheduling with Precedence Constraints]]**\\ with Julien Robert. //SODA,// 491-500, Jan. 2008. | ||
+ | * **[[%%publiRoot%%/2008/2008-LATA-RST.pdf|On the analysis of ”simple” 2D stochastic cellular automata]]**\\ with Damien Regnault and Éric Thierry. //LATA,// LNCS 5196:452-463, Mar. 2008. | ||
+ | * **[[%%publiRoot%%/2008/2008-DNA14-BRS.pdf|Time optimal self-assembling of 2D and 3D shapes: the case of squares and cubes]]**\\ with Florent Becker and Éric Rémila. //DNA14,// LNCS 5347:144–155, June 2008. | ||
+ | * **[[%%publiRoot%%/2008/2008-OPODIS-LS.pdf|Graph augmentation via metrics embedding]]**\\ with Emmanuelle Lebhar. //OPODIS,// LNCS 5401:217-225, Dec. 2008. | ||
+ | |||
+ | * **2007** | ||
+ | * **[[%%publiRoot%%/2007/2007-ESA-RS.pdf|Non-clairvoyant batch sets scheduling: Fairness is fair enough]]**\\ with Julien Robert. //ESA,// LNCS 4698:742-753, Oct. 2007. | ||
+ | * **[[%%publiRoot%%/2007/2007-MFCS-RST.pdf|Progresses in the analysis of stochastic 2D cellular automata: a study of asynchronous 2D Minority]]**\\ with Damien Regnault and Éric Thierry. //MFCS,// LNCS 4708:320-332, Aug. 2007. | ||
+ | * **[[%%publiRoot%%/2007/2007-MFCS-CMRS.pdf|Small alliances in graphs]]**\\ with Rodolfo Carvajal, Martín Matamala, and Iván Rapaport. //MFCS, LNCS 4708:218-227, Aug. 2007.// | ||
+ | * **[[%%publiRoot%%/2007/2007-SODA-RS.pdf|Pull-Based Data Broadcast with Dependencies: Be Fair to Users, not to Items]]**\\ with Julien Robert. //SODA,// p. 238-247, Jan. 2007. | ||
+ | |||
+ | * **2006** | ||
+ | * **[[%%publiRoot%%/2006/2006-DS-LATIN.pdf|Customized Newspaper Problem: Data Broadcast with dependancies]]**\\ with Sandeep Dey. //LATIN,// LNCS 3887:362-373, Valdivia, march 2006. | ||
+ | * **[[%%publiRoot%%/2006/2006-FRST-LATIN2006.pdf|Asynchronous behavior of double-quiescent elementary cellular automata]]**\\ with Nazim Fatès, Damien Regnault and Éric Thierry. //LATIN,// LNCS 3887:455-466, Valdivia, march 2006. | ||
+ | * **[[%%publiRoot%%/2006/2006-TCS_special-DHLS.pdf|Could any graph be turn into a smallworld?]]**\\ with Philippe Duchon, Nicolas Hanusse and Emmanuelle Lebhar. //TCS,// 355(1):96-103, 2006. | ||
+ | * **[[%%publiRoot%%/2006/2006-SPAA-DHLS.pdf|Towards small world emergence]]**\\ with Philippe Duchon, Nicolas Hanusse and Emmanuelle Lebhar.//SPAA,// 225-232, july 2006. | ||
+ | * **[[%%publiRoot%%/2006/2006-FMST-TCS.pdf|Fully asynchronous behavior of double-quiescent elementary cellular automata]]**\\ with Nazim Fatès, Michel Morvan, Éric Thierry.//TCS,// 362(1-3):1-16, 2006. | ||
+ | |||
+ | * **2005** | ||
+ | * **[[%%publiRoot%%/2005/2005-LS-TCS.pdf|Close to optimal decentralized routing in long-range contact networks]]**\\ with Emmanuelle Lebhar. //TCS,// 348:294–310, 2005. | ||
+ | * **[[%%publiRoot%%/2005/2005-DHLS-DISC.pdf|Could any graph be turn into a smallworld?]]**\\ with Philippe Duchon, Nicolas Hanusse and, Emmanuelle Lebhar. //DISC,// LNCS 3724:512-513, Cracow, september 2005. | ||
+ | * **[[%%publiRoot%%/2005/2005-FMST-MFCS.pdf|Fully asynchronous behavior of double-quiescent elementary cellular automata]]**\\ with Nazim Fatès, Michel Morvan and Éric Thierry. //MFCS, LNCS 3618:316-327, Gdansk, september 2005.// | ||
+ | |||
+ | * **2004** | ||
+ | * **[[%%publiRoot%%/2004/2004-LS-ICALP2004.pdf|Almost optimal decentralized routing in long-range contact networks]]**\\ with Emmanuelle Lebhar. //ICALP,// Turku, Finland, july 2004. [[%%publiRoot%%/2004/2004-LS-ICALP2004-FULL.pdf|Full]] | ||
+ | * **[[%%publiRoot%%/2004/2004-AS-EPJB.pdf|An Internet Graph Model based on trade-off optimization]]**\\ with José-Ignacio Alvarez-Hamelin. //European Physical Journal B (EPJB),// 38(2):231-238, 2004.\\ //A preliminary version of the paper was presented at the Conference on Growing Networks and Graphs in Statistical Physics, Finance, Biology and Social Systems, Rome, 1-5 Sep. 2003.// | ||
+ | |||
+ | * **2003** | ||
+ | * **[[%%publiRoot%%/2003/KS03.pdf|The data broadcast problem with non-uniform transmission times]]**\\ with Claire Kenyon. //Algorithmica,// 35:146-175, February 2003.\\ //A preliminary version of this paper was published in SODA 1999, pages 547-556.// | ||
+ | |||
+ | * **2000** | ||
+ | * **[[%%publiRoot%%/2000/Schabanel-PhDThesis.ps.gz|Algorithmes d'approximation pour les télécommunications sans fil : Ordonnancement pour la dissémination de données et Allocation statique de fréquences]]** (in French) [[%%publiRoot%%/2000/Schabanel-PhDThesis.pdf|PDF]]\\ //PhD Thesis,// École normale supérieure de Lyon, 2000. Advisors: Claire Kenyon and Stéphane Ubéda (local advisor). | ||
+ | * **[[%%publiRoot%%/2000/KSY2000.pdf|Polynomial-Time Approximation Scheme for Data Broadcast]]**\\ with Claire Kenyon and Neal E. Young. //STOC,// pages 659-666, May 2000. | ||
+ | * **[[%%publiRoot%%/2000/S00.pdf|The databroadcast problem with preemption]]**\\ //STACS,// LNCS 1770:181-192, Lille, February 2000. [[%%publiRoot%%/1999/S99-RR1999-49.ps.gz|Full]] | ||
+ | |||
+ | * **1999** | ||
+ | * **[[%%publiRoot%%/1999/KS99.pdf|The data broadcast problem with non-uniform transmission times]]**\\ with Claire Kenyon. //SODA,// pp.547–556. SIAM, Jan. 1999. | ||
+ | * **[[%%publiRoot%%/1999/FS99.ps.gz|A randomized BSP algorithm for the maximal independent set problem]]**\\ with Afonso Ferreira. In //PPL,// 9(3):411-422, 1999.\\ //A preliminary version was published in I-SPAN'99, pages 284-289, june 1999.// | ||
+ | |||
+ | * **1998 and beyond** | ||
+ | * **[[%%publiRoot%%/1998/SUZ98.ps.gz|Parallel algorithm for the optimization of the span of an hexagonal frequency planning graph]]**\\ with Stéphane Ubéda and Janez Žerovnik. //Telepar,// pages 237-241, Boston, Avril 1998. SCS. | ||
+ | * **[[%%publiRoot%%/1997/BGMS97-RR1997-13.ps.gz|Concurrent rebalancing of AVL trees: a fine-grained approach]]**\\ with Luc Bougé, J. Gabarro, and X. Messeguer. //Euro-Par,// LNCS 1300:421-429, Août 1997. [[%%publiRoot%%/1998/BGMS98-RR1998-18.ps.gz|Full]] | ||
+ | * **[[%%publiRoot%%/1996/ALST96.ps.gz|Basic linear algebra operations in SLI arithmetic]]**\\ with M. A. Anuta, D. W. Lozier, and Peter R. Turner. //Euro-Par,// LNCS 1124:193-202, Août 1996. | ||
+ | |||
+ | === Popularization === | ||
+ | |||
+ | * 2016 | ||
+ | * **[[%%publiRoot%%/2016/2016-Tangente-Schabanel1.pdf|Vérifier une preuve en n'en lisant que quelques lettres !]]**\\ Nicolas Schabanel. //[[http://www.poleditions.com/pole/publications.php?collection=Tangente%20HS%20kiosque|Tangente]]//, Hors série n°55:144-147 Les démonstrations, Jan. 2016 | ||
+ | * **[[%%publiRoot%%/2016/2016-Tangente-Schabanel1.pdf|Le «petit» théorème PCP]]**\\ Nicolas Schabanel. //[[http://www.poleditions.com/pole/publications.php?collection=Tangente%20HS%20kiosque|Tangente]]//, Hors série n°55:148-151 Les démonstrations, Jan. 2016 | ||
+ | * **[[%%publiRoot%%/2016/2016-Tangente-Schabanel1.pdf|Réduire la taille d'une preuve]]**\\ Nicolas Schabanel. //[[http://www.poleditions.com/pole/publications.php?collection=Tangente%20HS%20kiosque|Tangente]]//, Hors série n°55:152-155 Les démonstrations, Jan. 2016 | ||
+ | * 2015 | ||
+ | * **[[http://www.societe-informatique-de-france.fr/wp-content/uploads/2015/03/1024-hs1-guion-schabanel.pdf|La médiation en informatique vue par le CNRS]]**\\ with Laure Guion. //1024// (Bulletin de la Société Informatique de France), //[[http://www.societe-informatique-de-france.fr/bulletin/1024-numero-hs1/|Hors-série numéro 1 « Médiation scientifique : de la science informatique au grand public »]],// p.19-21, février 2015. | ||
+ | * **[[http://www.societe-informatique-de-france.fr/wp-content/uploads/2015/03/1024-hs1-schabanel.pdf|Les hottes du Père Noël]]**\\ //1024// (Bulletin de la Société Informatique de France), //[[http://www.societe-informatique-de-france.fr/bulletin/1024-numero-hs1/|Hors-série numéro 1 « Médiation scientifique : de la science informatique au grand public »]],// p.79-82, février 2015. | ||
+ | |||
+ | * 2013 | ||
+ | * **[[%%publiRoot%%/2012/2012-Maths-Pansu-Schabanel.pdf|Couper, attendrir, trancher, réduire : un conte culinaire sur la résolution informatique des problèmes difficiles.]]** (in French)\\ With Pierre Pansu. //[[http://smf.emath.fr/content/lexplosion-continue-sommaire|Mathématiques, l’explosion continue]],// pages 15-22, 2013. | ||
+ | |||
+ | * 2007 | ||
+ | * **[[http://interstices.info/jcms/c_15920/routage-dans-les-petits-mondes?qs=id%3Djalios_5127|Routage dans les petits mondes]] [[%%publiRoot%%/2007/2007-Interstices-LS.pdf|PDF]]**\\ with Emmanuelle Lebhar. //)i( interstices// INRIA popularization website, 2007. | ||
+ | |||
+ | * 2003 | ||
+ | * **[[%%publiRoot%%/2003/2003.04-Minotaure-Schabanel.pdf|Thèse idiote: le hasard fabrique des certitudes]]** (in French)\\ //Le minotaure// (trimenstrial journal, 20 000ex), 1:66-69, april-june 2003. | ||
+ | |||
+ | === Teaching === | ||
+ | |||
+ | === Other === | ||
+ | |||
+ | * **Algoseum:** “Bringing scientific interactive games and exhibitions to science museum” |