RSeQC
Description
RSeQC provides a number of useful modules that can comprehensively evaluate high throughput sequence data especially RNA-seq data. Some basic modules quickly inspect sequence quality, nucleotide composition bias, PCR bias and GC bias, while RNA-seq specific modules evaluate sequencing saturation, mapped reads distribution, coverage uniformity, strand specificity, transcript level RNA integrity etc.
More information
Homepage: http://rseqc.sourceforge.net/
Included extensions
logomaker-0.8.7, RSeQC-5.0.4
Availability
Module |
Generic |
E5 |
Lake |
Epyc |
Cascade |
Genoa |
|---|---|---|---|---|---|---|
✓ |